Research Outputs

Patent

Chang J, Kwan HS, Wong MC, Chan PL, Xie Y, Ho WCB. 2023. Regulation of fungal fruiting body development. U.S. Patent No. 11,668,702. Washington, DC: U.S. Patent and Trademark Office. https://patents.google.com/patent/US11668702B2/en

Recent Publications

  1. Chan PL, Kwan HS, Xie Y, Wong KH, Chang J. 2024. Transcriptome Analysis Reveals Mycelial and Fruiting Responses to Lithium Chloride in Coprinopsis cinerea. Journal of Fungi.10:140.
  2. Wong MC, Chan KM, Wong TT, Tang HW, Chung HY, Kwan HS. 2023. Quantitative Textural and Rheological Data on Different Levels of Texture-Modified Food and Thickened Liquids Classified Using the International Dysphagia Diet Standardisation Initiative (IDDSI) Guideline. Foods. 12:3765.
  3. Lauw S, Kei N, Chan PL, Yau TK, Ma KL, Szeto CYY, Lin JS-C, Wong SH, Cheung PCK, Kwan HS. 2023. Effects of Synbiotic Supplementation on Metabolic Syndrome Traits and Gut Microbial Profile among Overweight and Obese Hong Kong Chinese Individuals: A Randomized Trial. Nutrients.15:4248. https://doi.org/10.3390/nu15194248
  4. Xie Y, Chan PL, Kwan HS, Chang J. 2023. The Genome-Wide Characterization of Alternative Splicing and RNA Editing in the Development of Coprinopsis cinerea. Journal of Fungi (Basel). 9:915. doi: 10.3390/jof9090915.
  5. Chan PL, Lauw S, Ma KL, Kei N, Ma KL, Wong YO, Lam HY, Ting YY, Yau TK, Nong W, Huang D, Xie Y, Cheung PCK, Kwan HS. 2022. ProBioQuest: a database and semantic analysis engine for literature, clinical trials and patents related to probiotics. Database 2022: baac059.
  6. Cheung MK, Yue GG, Lauw S, Li CS, Yung MY, Ng SC, Yip HC, Kwan HS, Chiu PW, Lau CB. 2022. Alterations in gut microbiota of esophageal squamous cell carcinoma patients. Journal of Gastroenterology and Hepatology. doi:10.1111/jgh.159411.
  7. Zhang J, Shen N, Li C, Xiang X, Liu G, Gui Y, Patev S, Hibbett DS, Barry K, Andreopoulos W, Lipzen A. Riley R, He G, Yan M, Grigoriev IV, Kwan HS, Cheung MK, Bian Y, Xiao Y. 2022. Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes. Journal of Advanced Research 38: 91-106.
  8. Tang Y, Ma KY, Cheung MK, Yang CH, Wang Y, Hu X, Kwan HS, Chu KH. 2021. Gut Microbiota in Decapod Shrimps: Evidence of Phylosymbiosis. Microbial Ecology 82:994-1007.
  9. Zhang L, Gong W, Li C, Shen N, Gui Y, Bian Y, Kwan HS, Cheung MK, Xiao Y. 2021. RNA-Seq-based high-resolution linkage map reveals the genetic architecture of fruiting body development in shiitake mushroom, Lentinula edodes. Computational and structural biotechnology journal 19:1641-1653.
  10. Xie Y, Zhong Y, Chang J, Kwan HS. 2021. Chromosome-level de novo assembly of Coprinopsis cinerea A43mut B43mut pab1-1# 326 and genetic variant identification of mutants using Nanopore MinION sequencing. Fungal Genetics and Biology 146: 103485.
  11. Huang D, Yi X, Zhou Y, Yao H, Xu H, Wang J, Zhang S, Nong W, Wang P, Shi L, Xuan C, Li M, Wang J, Li W, Kwan HS, Sham PC, Wang K, Li MJ. 2020. Ultrafast and scalable variant annotation and prioritization with big functional genomics data. Genome Research gr-267997.
  12. Xie Y, Chang J, Kwan HS. 2020. Carbon metabolism and transcriptome in developmental paths differentiation of a homokaryotic Coprinopsis cinerea strain. Fungal Genetics and Biology 143: 103432.
  13. Lau AY, Xie Y, Cheung MK, Cheung PC, Kwan HS. 2020. Genome-wide mRNA and miRNA analysis in the early stages of germ tube outgrowth in Coprinopsis cinerea. Fungal Genetics and Biology 142: 103416.
  14. Lam KL, Cheng WY, Su Y, Li X, Wu X, Wong KH, Kwan HS, Cheung PCK. 2020. Use of random forest analysis to quantify the importance of the structural characteristics of beta-glucans for prebiotic development. Food Hydrocolloids 108: 106001.
  15. Lam KL, Cheng WY, Yang F, Lin S, You L, Chiou J, Kwan HS, Cheung PCK. 2020. Framework as a Service, FaaS: Personalized Prebiotic Development for Infants with the Elements of Time and Parametric Modelling of in vitro Fermentation. Microorganisms 8: 623.
  16. Cheung MK, Yue GG, Tsui KY, Gomes AJ, Kwan HS, Chiu PW, San Lau CB. 2020. Discovery of an interplay between the gut microbiota and esophageal squamous cell carcinoma in mice. American Journal of Cancer Research 10: 2409
  17. Shu SA, Yuen AWT, Woo E, Chu KH, Kwan HS, Yang GX, Yang Y, Leung PSC. 2019. Microbiota and Food Allergy. Clinical Reviews in Allergy & Immunology 57: 83-97.

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